BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028B06SP1|AL428850
(824 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1710 1619 0.0
>3x_Contig1710
Length = 16151
Score = 1619 bits (814), Expect = 0.0
Identities = 820/824 (99%)
Strand = Plus / Plus
Query: 1 taaaccctgactcatttccatttatcctactatctatatatacaacgtattatgaattta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6803 taaaccctgactcatttccatttatcctactatctatatatacaacgtattatgaattta 6862
Query: 61 tctattgacagtcgcgacgctgtcatcagattacgaaataagctacccgcattcgagatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6863 tctattgacagtcgcgacgctgtcatcagattacgaaataagctacccgcattcgagatt 6922
Query: 121 tgcattgcctggcacaattgtggccaccgtttaggccgctggcactagccaaaaattgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6923 tgcattgcctggcacaattgtggccaccgtttaggccgctggcactagccaaaaattgac 6982
Query: 181 actagtaaactccctacaccacatattaatcggtaagttactctactccatcaattgtga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6983 actagtaaactccctacaccacatattaatcggtaagttactctactccatcaattgtga 7042
Query: 241 aagcatttatacagctcaagagcaggtttgggattgagataaatatcatctcgagaaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7043 aagcatttatacagctcaagagcaggtttgggattgagataaatatcatctcgagaaata 7102
Query: 301 ccattatataaagctttataactatcacgacggaaacccttctagcagctatcagtttgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7103 ccattatataaagctttataactatcacgacggaaacccttctagcagctatcagtttgc 7162
Query: 361 agcggatcacgggcatgtttctgttcatcccaccttctatcccgtcgcaccattatagtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7163 agcggatcacgggcatgtttctgttcatcccaccttctatcccgtcgcaccattatagtg 7222
Query: 421 tggatattttggatttcgaaaattctgaaaactgaaattctcaagaaataaaaggaaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7223 tggatattttggatttcgaaaattctgaaaactgaaattctcaagaaataaaaggaaaaa 7282
Query: 481 ggttagatgggagaacatttatctgtwaathacatcgattagattgcacaagagaaaaaa 540
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 7283 ggttagatgggagaacatttatctgtaaataacatcgattagattgcacaagagaaaaaa 7342
Query: 541 aaatgattgtgattcgctagtgcatttgacgatactattggaacactgattacacctgtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7343 aaatgattgtgattcgctagtgcatttgacgatactattggaacactgattacacctgtt 7402
Query: 601 ggtaattgatctcgcttgavagaagaagattgayataatacatcaagccttttcctcctt 660
||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 7403 ggtaattgatctcgcttgaaagaagaagattgaaataatacatcaagccttttcctcctt 7462
Query: 661 catttagaactgagatatcaatatttattaaggttacatttcactacgaattggacacag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7463 catttagaactgagatatcaatatttattaaggttacatttcactacgaattggacacag 7522
Query: 721 gaattgactgtaccagaagataaaatcggcttacatttgatattcaattgtattaaccaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7523 gaattgactgtaccagaagataaaatcggcttacatttgatattcaattgtattaaccaa 7582
Query: 781 gttacgggaacgaatcaattgtttgtgtacatatattaagaaaa 824
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7583 gttacgggaacgaatcaattgtttgtgtacatatattaagaaaa 7626
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7068
Number of Sequences: 1807
Number of extensions: 7068
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 824
length of database: 10,358,551
effective HSP length: 16
effective length of query: 808
effective length of database: 10,329,639
effective search space: 8346348312
effective search space used: 8346348312
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)